Create an MMseqs database from an existing FASTA/Q file
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
sequence{:bash}
:file
Input sequences in FASTA/Q (zipped or unzipped) format to parse into an mmseqs database
*.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz,fastq,fastq.gz,fq,fq.gz}
db{:bash}
${prefix}/{:bash}
:directory
The created MMseqs2 database
versions_mmseqs{:bash}
${task.process}{:bash}
:string
The name of the process
mmseqs{:bash}
The name of the tool
mmseqs version{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
MMseqs2: ultra fast and sensitive sequence search and clustering suite
